STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Snas_2530N-acyl-D-aspartate deacylase; PFAM: Amidohydrolase 3; D-aminoacylase domain protein; amidohydrolase; KEGG: D-aminoacylase. (522 aa)    
Predicted Functional Partners:
Snas_1815
KEGG: lch:Lcho_0086 D-serine deaminase.
 
   
 0.895
Snas_5877
Beta-N-acetylhexosaminidase; PFAM: Glycoside hydrolase, family 20, catalytic core; KEGG: xcv:XCV3209 beta-hexosaminidase.
     0.795
Snas_6294
PFAM: beta-lactamase; KEGG: hypothetical protein.
      0.739
Snas_3887
PFAM: PfkB domain protein; KEGG: rpi:Rpic_0690 PfkB domain protein.
     0.662
Snas_2529
Putative signal transduction protein with Nacht domain; KEGG: pmy:Pmen_1048 signal transduction protein.
       0.608
Snas_1386
D-alanyl-D-alaninecarboxypeptidase/ D-alanyl-D-alanine-endopeptidase; KEGG: pfs:PFLU1023 putative penicillin-binding exported protein; TIGRFAM: D-alanyl-D-alanine carboxypeptidase/D- alanyl-D-alanine-endopeptidase; PFAM: peptidase S13 D-Ala-D-Ala carboxypeptidase C.
      0.583
Snas_4631
Gluconolactonase; PFAM: SMP-30/Gluconolaconase/LRE domain protein; KEGG: vei:Veis_1531 SMP-30/gluconolaconase/LRE domain-containing protein.
      0.519
Snas_2528
KEGG: ade:Adeh_2880 TetR family transcriptional regulator.
       0.458
Snas_6206
PFAM: beta-lactamase; KEGG: sml:Smlt3495 putative beta-lactamase.
      0.456
Snas_3886
PFAM: KDPG and KHG aldolase; KEGG: vei:Veis_3773 2-dehydro-3-deoxy-6- phosphogalactonate aldolase.
 
     0.433
Your Current Organism:
Stackebrandtia nassauensis
NCBI taxonomy Id: 446470
Other names: S. nassauensis DSM 44728, Stackebrandtia nassauensis DSM 44728, Stackebrandtia nassauensis str. DSM 44728, Stackebrandtia nassauensis strain DSM 44728
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