STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Snas_2541PFAM: amidohydrolase; Amidohydrolase 3; KEGG: ppw:PputW619_3055 hydroxydechloroatrazine ethylaminohydrolase. (457 aa)    
Predicted Functional Partners:
Snas_2537
Hydroxyisourate hydrolase; KEGG: csa:Csal_0101 transthyretin; TIGRFAM: hydroxyisourate hydrolase; PFAM: Transthyretin; SMART: Transthyretin; Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily.
 
   
 0.965
Snas_2542
TIGRFAM: xanthine dehydrogenase D subunit; PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; KEGG: sfu:Sfum_2012 aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding.
 
 
 0.965
Snas_2538
Urate oxidase; Catalyzes the oxidation of uric acid to 5-hydroxyisourate, which is further processed to form (S)-allantoin.
 
  
 0.947
Snas_2536
TIGRFAM: OHCU decarboxylase; KEGG: scl:sce5877 putative bifunctional allantoicase/OHCU decarboxylase.
 
     0.932
Snas_2539
PFAM: molybdopterin dehydrogenase FAD-binding; KEGG: smd:Smed_4005 molybdopterin dehydrogenase FAD- binding.
 
  
 0.920
Snas_2540
PFAM: [2Fe-2S]-binding domain protein; ferredoxin; KEGG: scl:sce5894 hypothetical protein.
 
  
 0.908
alc
Allantoicase; KEGG: scl:sce5877 putative bifunctional allantoicase/OHCU decarboxylase; TIGRFAM: allantoicase; PFAM: Allantoicase region; Belongs to the allantoicase family.
 
     0.749
Snas_2544
PFAM: protein of unknown function DUF182; KEGG: msl:Msil_0236 protein of unknown function DUF182.
 
    0.746
Snas_2550
TIGRFAM: allantoinase; PFAM: amidohydrolase; KEGG: scl:sce5876 allantoinase.
 
  
 0.677
Snas_2534
KEGG: rpe:RPE_1661 4-diphosphocytidyl-2C-methyl-D- erythritol synthase.
 
     0.646
Your Current Organism:
Stackebrandtia nassauensis
NCBI taxonomy Id: 446470
Other names: S. nassauensis DSM 44728, Stackebrandtia nassauensis DSM 44728, Stackebrandtia nassauensis str. DSM 44728, Stackebrandtia nassauensis strain DSM 44728
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