STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Snas_2735PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: atc:AGR_L_3322 putative integral membrane protein. (268 aa)    
Predicted Functional Partners:
Snas_2734
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: eca:ECA0849 putative sugar ABC transporter, permease protein.
  0.994
Snas_2733
PFAM: extracellular solute-binding protein family 1; KEGG: ara:Arad_0129 sugar ABC transporter.
 
 0.989
Snas_0204
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: scl:sce3058 sugar ABC transporter, permease protein.
 
 0.866
Snas_0757
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: yen:YE0461 sugar transport system, permease protein.
 
 0.861
Snas_4694
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: xfa:XF2447 ABC transporter sugar permease.
 
 0.861
Snas_2856
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: vei:Veis_0945 binding-protein-dependent transport systems inner membrane component.
 
 0.860
Snas_2014
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cvi:CV_0261 sugar ABC transporter permease protein.
 
 0.853
Snas_3122
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: smd:Smed_2314 binding-protein-dependent transport systems inner membrane component.
 
 0.852
Snas_2759
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mca:MCA1942 sugar ABC transporter, permease protein.
 
 0.850
Snas_1829
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rpb:RPB_0648 binding-protein-dependent transport systems inner membrane component.
 
 0.849
Your Current Organism:
Stackebrandtia nassauensis
NCBI taxonomy Id: 446470
Other names: S. nassauensis DSM 44728, Stackebrandtia nassauensis DSM 44728, Stackebrandtia nassauensis str. DSM 44728, Stackebrandtia nassauensis strain DSM 44728
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