STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Snas_2790KEGG: hypothetical protein. (237 aa)    
Predicted Functional Partners:
Snas_2791
PFAM: thiamine pyrophosphate protein TPP binding domain protein; thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; KEGG: cbd:CBUD_0736 pyruvate dehydrogenase [cytochrome]; Belongs to the TPP enzyme family.
       0.648
Snas_2792
PFAM: ferredoxin-dependent glutamate synthase; KEGG: pag:PLES_14331 putative glutamate synthase, large subunit; Belongs to the glutamate synthase family.
       0.619
Snas_5900
PFAM: protein of unknown function DUF664.
  
     0.550
Snas_2390
PFAM: protein of unknown function DUF664.
  
     0.523
Snas_5700
KEGG: rlt:Rleg2_1526 hypothetical protein.
  
     0.512
Snas_0432
PFAM: protein of unknown function DUF664.
  
     0.499
Snas_1764
PFAM: protein of unknown function DUF664.
  
     0.435
Snas_2793
PFAM: Hemerythrin HHE cation binding domain protein; KEGG: afw:Anae109_3504 hemerythrin HHE cation binding domain-containing protein.
       0.423
Snas_5699
PFAM: protein of unknown function DUF664.
  
     0.414
Your Current Organism:
Stackebrandtia nassauensis
NCBI taxonomy Id: 446470
Other names: S. nassauensis DSM 44728, Stackebrandtia nassauensis DSM 44728, Stackebrandtia nassauensis str. DSM 44728, Stackebrandtia nassauensis strain DSM 44728
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.