STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Snas_2793PFAM: Hemerythrin HHE cation binding domain protein; KEGG: afw:Anae109_3504 hemerythrin HHE cation binding domain-containing protein. (185 aa)    
Predicted Functional Partners:
Snas_2792
PFAM: ferredoxin-dependent glutamate synthase; KEGG: pag:PLES_14331 putative glutamate synthase, large subunit; Belongs to the glutamate synthase family.
       0.516
Snas_2791
PFAM: thiamine pyrophosphate protein TPP binding domain protein; thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; KEGG: cbd:CBUD_0736 pyruvate dehydrogenase [cytochrome]; Belongs to the TPP enzyme family.
       0.498
Snas_4186
Transcriptional regulator, GntR family with aminotransferase domain protein; PFAM: aminotransferase class I and II; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: cko:CKO_00371 hypothetical protein.
  
     0.476
Snas_2790
KEGG: hypothetical protein.
       0.423
Snas_2234
KEGG: smt:Smal_3698 hypothetical protein.
  
     0.421
Your Current Organism:
Stackebrandtia nassauensis
NCBI taxonomy Id: 446470
Other names: S. nassauensis DSM 44728, Stackebrandtia nassauensis DSM 44728, Stackebrandtia nassauensis str. DSM 44728, Stackebrandtia nassauensis strain DSM 44728
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