STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Snas_2821PFAM: membrane-flanked domain; KEGG: aeh:Mlg_1151 membrane-flanked domain- containing protein. (527 aa)    
Predicted Functional Partners:
Snas_2820
PFAM: membrane-flanked domain; KEGG: xca:xccb100_3922 hypothetical protein.
 
  
 0.965
Snas_5070
PFAM: membrane-flanked domain; KEGG: smt:Smal_3577 membrane-flanked domain.
 
  
 0.852
Snas_2682
KEGG: mucin-associated surface protein (MASP).
  
     0.572
Snas_5662
Hypothetical protein.
  
     0.542
Snas_3140
PFAM: proteinase inhibitor I16 subtilisin-type inhibitor; Belongs to the protease inhibitor I16 (SSI) family.
  
     0.541
Snas_5659
Hypothetical protein.
  
     0.525
Snas_2818
PFAM: transport system permease protein; KEGG: atc:AGR_pAT_449 ferric enterobactin transport protein FepD; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
       0.515
Snas_2819
PFAM: periplasmic binding protein; KEGG: ypb:YPTS_1658 periplasmic binding protein.
       0.515
Snas_1804
Hypothetical protein.
  
    0.473
Snas_2212
Hypothetical protein.
  
    0.428
Your Current Organism:
Stackebrandtia nassauensis
NCBI taxonomy Id: 446470
Other names: S. nassauensis DSM 44728, Stackebrandtia nassauensis DSM 44728, Stackebrandtia nassauensis str. DSM 44728, Stackebrandtia nassauensis strain DSM 44728
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.