STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Snas_2863Hypothetical protein. (108 aa)    
Predicted Functional Partners:
Snas_2862
PFAM: OsmC family protein; KEGG: ara:Arad_2064 redox protein.
       0.773
Snas_2864
RTX toxins and related Ca2+-binding protein- like protein; KEGG: swp:swp_1383 hemolysin-type calcium-binding region.
       0.648
Snas_2865
Hypothetical protein; KEGG: acp:A2cp1_3829 response regulator receiver protein.
       0.590
Snas_2861
PFAM: glycoside hydrolase family 38; Glycoside hydrolase family 38 central region; glycosyl hydrolase 38 domain protein; KEGG: MAN2C1; mannosidase, alpha, class 2C, member 1; K01191 alpha-mannosidase.
       0.529
Snas_2866
KEGG: ent:Ent638_0391 streptogramin A acetyl transferase.
       0.436
vgb
Putative hydrolase; Inactivates the type B streptogramin antibiotics by linearizing the lactone ring at the ester linkage, generating a free phenylglycine carboxylate and converting the threonyl moiety into 2- amino-butenoic acid.
       0.436
Your Current Organism:
Stackebrandtia nassauensis
NCBI taxonomy Id: 446470
Other names: S. nassauensis DSM 44728, Stackebrandtia nassauensis DSM 44728, Stackebrandtia nassauensis str. DSM 44728, Stackebrandtia nassauensis strain DSM 44728
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