STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Snas_2918PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: ara:Arad_1442 3-demethylubiquinone-9 3- methyltransferase protein. (264 aa)    
Predicted Functional Partners:
Snas_2919
Hypothetical protein.
       0.570
Snas_2920
PFAM: Methyltransferase type 12; Methyltransferase type 11; KEGG: mxa:MXAN_0433 hypothetical protein.
   
   0.466
Snas_2922
PFAM: glycosyl transferase family 2; KEGG: gur:Gura_1563 glycosyl transferase family protein.
  
    0.453
Snas_2921
KEGG: gme:Gmet_3073 hypothetical protein.
       0.451
Snas_2923
PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility domain; polysaccharide biosynthesis protein CapD; dTDP-4- dehydrorhamnose reductase; KEGG: mrd:Mrad2831_1322 NAD-dependent epimerase/dehydratase.
       0.448
Your Current Organism:
Stackebrandtia nassauensis
NCBI taxonomy Id: 446470
Other names: S. nassauensis DSM 44728, Stackebrandtia nassauensis DSM 44728, Stackebrandtia nassauensis str. DSM 44728, Stackebrandtia nassauensis strain DSM 44728
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