STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Snas_2924Methylthioadenosine phosphorylase; Purine nucleoside phosphorylase involved in purine salvage. (263 aa)    
Predicted Functional Partners:
Snas_2276
KEGG: pca:Pcar_2170 aIF-2BI family translation initiation factor; TIGRFAM: eIF-2B alpha/beta/delta-related uncharacterized protein; PFAM: initiation factor 2B related; Belongs to the eIF-2B alpha/beta/delta subunits family.
 
 
 0.951
Snas_4179
PFAM: purine or other phosphorylase family 1; KEGG: nmu:Nmul_A0542 response regulator receiver domain-containing protein.
    
 0.946
speE
Spermine synthase; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine.
     
 0.943
apt
Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.
 
 0.935
Snas_3755
PFAM: amidohydrolase; Amidohydrolase 3; KEGG: reu:Reut_C6231 hypothetical protein.
  
 
 0.915
Snas_2922
PFAM: glycosyl transferase family 2; KEGG: gur:Gura_1563 glycosyl transferase family protein.
 
   
 0.866
Snas_2921
KEGG: gme:Gmet_3073 hypothetical protein.
 
   
 0.865
Snas_2923
PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility domain; polysaccharide biosynthesis protein CapD; dTDP-4- dehydrorhamnose reductase; KEGG: mrd:Mrad2831_1322 NAD-dependent epimerase/dehydratase.
 
   
 0.862
guaA
GMP synthase, large subunit; Catalyzes the synthesis of GMP from XMP.
  
 
 0.662
Snas_2920
PFAM: Methyltransferase type 12; Methyltransferase type 11; KEGG: mxa:MXAN_0433 hypothetical protein.
 
     0.648
Your Current Organism:
Stackebrandtia nassauensis
NCBI taxonomy Id: 446470
Other names: S. nassauensis DSM 44728, Stackebrandtia nassauensis DSM 44728, Stackebrandtia nassauensis str. DSM 44728, Stackebrandtia nassauensis strain DSM 44728
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