STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Snas_3074PFAM: GCN5-related N-acetyltransferase; KEGG: bam:Bamb_4801 GCN5-related N- acetyltransferase. (172 aa)    
Predicted Functional Partners:
Snas_3209
PFAM: GCN5-related N-acetyltransferase; KEGG: vfm:VFMJ11_1463 ribosomal-protein-alanine acetyltransferase.
  
   0.523
Snas_6359
KEGG: xfa:XF0614 hypothetical protein.
  
     0.502
Snas_3075
KEGG: pfl:PFL_3748 hypothetical protein.
       0.445
Snas_3365
KEGG: pfl:PFL_5198 hypothetical protein.
  
    0.434
Your Current Organism:
Stackebrandtia nassauensis
NCBI taxonomy Id: 446470
Other names: S. nassauensis DSM 44728, Stackebrandtia nassauensis DSM 44728, Stackebrandtia nassauensis str. DSM 44728, Stackebrandtia nassauensis strain DSM 44728
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.