STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Snas_3171PFAM: acriflavin resistance protein; KEGG: tgr:Tgr7_1732 acriflavin resistance protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1074 aa)    
Predicted Functional Partners:
Snas_5941
PFAM: Peptidoglycan-binding domain 1 protein; KEGG: gur:Gura_3473 peptidoglycan binding domain- containing protein.
  
 
 0.943
Snas_6424
PFAM: Interferon-induced transmembrane protein; KEGG: hypothetical protein.
  
 
 0.917
Snas_3825
TIGRFAM: preprotein translocase, YajC subunit; PFAM: YajC family protein; KEGG: ott:OTT_1162 preprotein translocase subunit YajC.
    
 
 0.817
Snas_3170
Transcriptional regulator, MarR family; PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: scl:sce1783 MarR family transcriptional regulator.
 
     0.615
Snas_3169
PFAM: pyruvate phosphate dikinase PEP/pyruvate- binding; PEP-utilising protein mobile region; KEGG: scl:sce7847 pyruvate, water dikinase.
 
     0.607
Snas_1053
GAF sensor hybrid histidine kinase; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; GAF domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein; GAF domain protein; histidine kinase HAMP region domain protein; KEGG: scl:sce7807 hypothetical protein.
 
 
 
 0.541
Snas_3168
Hypothetical protein; KEGG: asu:Asuc_2080 cinnamoyl ester hydrolase.
       0.533
Your Current Organism:
Stackebrandtia nassauensis
NCBI taxonomy Id: 446470
Other names: S. nassauensis DSM 44728, Stackebrandtia nassauensis DSM 44728, Stackebrandtia nassauensis str. DSM 44728, Stackebrandtia nassauensis strain DSM 44728
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