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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Snas_3209PFAM: GCN5-related N-acetyltransferase; KEGG: vfm:VFMJ11_1463 ribosomal-protein-alanine acetyltransferase. (167 aa)    
Predicted Functional Partners:
Snas_3210
PFAM: GCN5-related N-acetyltransferase; KEGG: mlo:mll2524 acetyltransferase.
  
   0.549
Snas_3074
PFAM: GCN5-related N-acetyltransferase; KEGG: bam:Bamb_4801 GCN5-related N- acetyltransferase.
  
   0.523
Snas_2487
PFAM: GCN5-related N-acetyltransferase; KEGG: pla:Plav_1643 GCN5-related N- acetyltransferase.
  
     0.497
Snas_3021
Hypothetical protein.
  
     0.422
Snas_2568
Hypothetical protein; KEGG: rpe:RPE_2258 beta-lactamase.
  
     0.421
Your Current Organism:
Stackebrandtia nassauensis
NCBI taxonomy Id: 446470
Other names: S. nassauensis DSM 44728, Stackebrandtia nassauensis DSM 44728, Stackebrandtia nassauensis str. DSM 44728, Stackebrandtia nassauensis strain DSM 44728
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