STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Snas_3232Transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: bpy:Bphyt_6041 transcriptional regulator, AraC family. (296 aa)    
Predicted Functional Partners:
Snas_2961
Transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: smt:Smal_2337 transcriptional regulator, AraC family.
  
   0.595
Snas_3231
PFAM: PspC domain protein; KEGG: ank:AnaeK_3719 phage shock protein C, PspC.
       0.527
Snas_4287
PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: ank:AnaeK_2027 methyltransferase type 11.
  
     0.515
Snas_2631
Transcriptional regulator, AraC family; PFAM: AraC protein arabinose-binding/dimerisation; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: psa:PST_0880 transcriptional regulator, AraC family.
  
   0.494
Snas_4339
Transcriptional regulator, AraC family; PFAM: ThiJ/PfpI domain protein; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: bph:Bphy_0475 AraC family transcriptional regulator.
  
     0.482
Snas_0431
Transcriptional regulator, AraC family; PFAM: ThiJ/PfpI domain protein; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: reu:Reut_B3587 transcriptional activator FtrA.
  
     0.479
Snas_3491
Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: mxa:MXAN_1683 LysR family transcriptional regulator.
  
    0.460
Snas_6336
Cytochrome P450-like protein; KEGG: mlo:mlr6364 cytochrome P-450; Belongs to the cytochrome P450 family.
  
     0.459
Snas_1113
Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: gsu:GSU0266 LysR family transcriptional regulator.
  
    0.439
Snas_6063
PFAM: Ricin B lectin; SMART: Ricin B lectin; KEGG: hch:HCH_00177 QXW lectin repeat-containing protein.
  
     0.434
Your Current Organism:
Stackebrandtia nassauensis
NCBI taxonomy Id: 446470
Other names: S. nassauensis DSM 44728, Stackebrandtia nassauensis DSM 44728, Stackebrandtia nassauensis str. DSM 44728, Stackebrandtia nassauensis strain DSM 44728
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