STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Snas_3484Transcriptional regulator, SARP family; PFAM: transcriptional activator domain; Tetratricopeptide TPR_4; transcriptional regulator domain protein; SMART: AAA ATPase; KEGG: scl:sce3803 putative ATP/GTP-binding protein. (981 aa)    
Predicted Functional Partners:
Snas_3482
KEGG: afw:Anae109_3667 ATPase-like protein.
  
  
 0.852
Snas_2412
PFAM: TPR repeat-containing protein; SMART: Tetratricopeptide domain protein; KEGG: hypothetical protein.
  
     0.546
Snas_3485
Hypothetical protein.
       0.526
Snas_3338
Transcriptional regulator, LuxR family; PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR; KEGG: bur:Bcep18194_A4972 transcriptional regulator.
  
    0.510
Snas_3572
Transcriptional regulator, LuxR family; PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR; KEGG: ret:RHE_PF00532 LuxR family transcriptional regulator.
  
    0.508
Snas_5694
PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: plu:plu0795 hypothetical protein.
  
    0.499
Snas_3486
PFAM: Lanthionine synthetase C family protein; KEGG: mxa:MXAN_2857 putative lantibiotic modification protein.
       0.484
Snas_0315
Transcriptional regulator, LuxR family; PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR; KEGG: ank:AnaeK_3528 transcriptional regulator, LuxR family.
  
    0.483
Snas_3487
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sml:Smlt3226 putative ABC transport protein.
       0.481
Snas_3488
PFAM: FAD linked oxidase domain protein; Berberine/berberine domain protein; KEGG: sde:Sde_0518 histidine kinase.
       0.481
Your Current Organism:
Stackebrandtia nassauensis
NCBI taxonomy Id: 446470
Other names: S. nassauensis DSM 44728, Stackebrandtia nassauensis DSM 44728, Stackebrandtia nassauensis str. DSM 44728, Stackebrandtia nassauensis strain DSM 44728
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.