STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Snas_3515KEGG: hypothetical protein. (646 aa)    
Predicted Functional Partners:
Snas_0739
KEGG: hypothetical protein.
  
     0.693
Snas_5490
Hypothetical protein.
  
    0.643
Snas_1599
PFAM: cell divisionFtsK/SpoIIIE; KEGG: bpt:Bpet4245 hypothetical protein.
  
   0.600
Snas_4154
KEGG: geo:Geob_0350 KWG repeat protein.
  
     0.558
Snas_2130
PFAM: cell divisionFtsK/SpoIIIE; KEGG: hpj:jhp0061 hypothetical protein.
  
   0.557
Snas_5090
KEGG: bid:Bind_0192 hypothetical protein.
  
     0.557
Snas_3502
PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; KEGG: she:Shewmr4_1596 peptidase S8 and S53, subtilisin, kexin, sedolisin; Belongs to the peptidase S8 family.
  
     0.544
Snas_2204
KEGG: similar to Cpsf6 protein.
  
     0.536
Snas_2611
PFAM: ABC-2 type transporter; KEGG: xau:Xaut_4131 ABC-2 type transporter.
  
     0.531
Snas_2610
PFAM: ABC-2 type transporter; KEGG: dol:Dole_0811 ABC-2 type transporter.
  
     0.529
Your Current Organism:
Stackebrandtia nassauensis
NCBI taxonomy Id: 446470
Other names: S. nassauensis DSM 44728, Stackebrandtia nassauensis DSM 44728, Stackebrandtia nassauensis str. DSM 44728, Stackebrandtia nassauensis strain DSM 44728
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.