STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Snas_3528PFAM: transport system permease protein; KEGG: atc:AGR_pAT_449 ferric enterobactin transport protein FepD; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. (336 aa)    
Predicted Functional Partners:
Snas_2816
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: atc:AGR_pAT_452 probable iron-siderophore uptake system ATP-binding component.
 
 0.892
Snas_3783
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: dac:Daci_3149 ABC transporter related.
 
 0.887
Snas_2746
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: yen:YE3621 iron-siderophore transport system, ATP-binding component.
 
 0.883
Snas_5334
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cvi:CV_2234 enterobactin-iron transport system ATP-binding protein.
 
 0.882
Snas_6327
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: hch:HCH_06574 ABC-type cobalamin/Fe3+- siderophores transport system, ATPase components.
 
 0.880
Snas_3868
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rsh:Rsph17029_3058 ABC transporter related.
 
 0.877
Snas_4513
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: hch:HCH_06574 ABC-type cobalamin/Fe3+- siderophores transport system, ATPase components.
 
 0.874
Snas_3527
PFAM: transport system permease protein; KEGG: mmw:Mmwyl1_0465 transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
   
0.855
Snas_6329
PFAM: periplasmic binding protein; KEGG: sat:SYN_01423 ABC-type transporter cobalamide binding protein.
 
 
 0.689
Snas_2819
PFAM: periplasmic binding protein; KEGG: ypb:YPTS_1658 periplasmic binding protein.
 
 
 0.643
Your Current Organism:
Stackebrandtia nassauensis
NCBI taxonomy Id: 446470
Other names: S. nassauensis DSM 44728, Stackebrandtia nassauensis DSM 44728, Stackebrandtia nassauensis str. DSM 44728, Stackebrandtia nassauensis strain DSM 44728
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