STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Snas_3567KEGG: rhi:NGR_b07810 hypothetical protein. (474 aa)    
Predicted Functional Partners:
Snas_1053
GAF sensor hybrid histidine kinase; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; GAF domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein; GAF domain protein; histidine kinase HAMP region domain protein; KEGG: scl:sce7807 hypothetical protein.
  
 
 0.932
Snas_3568
Hypothetical protein.
       0.773
Snas_5577
PFAM: multicopper oxidase type 3; multicopper oxidase type 1; multicopper oxidase type 2; KEGG: lhk:LHK_00714 multicopper oxidase, type 3 precursor.
  
 
 0.723
Snas_3569
PFAM: transcriptional regulator PadR family protein; KEGG: rpt:Rpal_2803 transcriptional regulator, PadR- like family.
 
     0.627
Snas_3566
PFAM: transcriptional regulator PadR family protein; KEGG: sfu:Sfum_0276 transcriptional regulator, PadR- like family.
 
     0.599
Snas_3903
Histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: histidine kinase A domain protein; histidine kinase HAMP region domain protein; ATP-binding region ATPase domain protein; KEGG: lch:Lcho_2475 histidine kinase.
 
      0.584
Snas_5346
Histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: ppd:Ppro_2227 integral membrane sensor signal transduction histidine kinase.
 
  
   0.549
Snas_3565
Hypothetical protein; KEGG: GK21299 gene product from transcript GK21299- RA.
       0.537
Snas_2475
PFAM: VanZ family protein.
  
     0.519
Snas_3570
KEGG: hypothetical protein LOC686639.
       0.517
Your Current Organism:
Stackebrandtia nassauensis
NCBI taxonomy Id: 446470
Other names: S. nassauensis DSM 44728, Stackebrandtia nassauensis DSM 44728, Stackebrandtia nassauensis str. DSM 44728, Stackebrandtia nassauensis strain DSM 44728
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.