STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Snas_3594KEGG: dal:Dalk_3532 magnesium chelatase; PFAM: ATPase associated with various cellular activities AAA_5; magnesium chelatase ChlI subunit; SMART: AAA ATPase. (310 aa)    
Predicted Functional Partners:
Snas_3593
Hypothetical protein; KEGG: mex:Mext_3009 magnesium chelatase subunit D.
 
 0.997
Snas_3928
Protoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX.
   
 
 0.921
hemH
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.
   
 
 0.915
Snas_3662
Hypothetical protein; KEGG: tau:Tola_0022 protoporphyrinogen oxidase.
     
  0.900
Snas_3592
Hypothetical protein.
       0.834
Snas_3595
Hypothetical protein.
       0.817
Snas_3591
RNA polymerase, sigma-24 subunit, ECF subfamily; KEGG: hypothetical LOC574629; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; TPR repeat- containing protein; SMART: Tetratricopeptide domain protein.
  
    0.776
cobB
Cobyrinic acid a,c-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of hydrogenobyrinate, using either L- glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family.
 
   
 0.715
Snas_1795
PFAM: von Willebrand factor type A; SMART: von Willebrand factor type A; KEGG: sun:SUN_2020 hypothetical protein.
  
 
 0.635
Snas_3738
PFAM: von Willebrand factor type A; SMART: von Willebrand factor type A; KEGG: bra:BRADO1313 hypothetical protein.
  
 
 0.635
Your Current Organism:
Stackebrandtia nassauensis
NCBI taxonomy Id: 446470
Other names: S. nassauensis DSM 44728, Stackebrandtia nassauensis DSM 44728, Stackebrandtia nassauensis str. DSM 44728, Stackebrandtia nassauensis strain DSM 44728
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