STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Snas_3623PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bxe:Bxe_B0892 ABC sugar transporter, ATPase subunit. (266 aa)    
Predicted Functional Partners:
Snas_3621
PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: bxe:Bxe_B0894 ABC sugar transporter, periplasmic ligand binding protein.
 
 0.997
Snas_3622
PFAM: inner-membrane translocator; KEGG: pna:Pnap_2604 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 0.995
Snas_3130
PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: bxe:Bxe_B0894 ABC sugar transporter, periplasmic ligand binding protein.
 
 0.976
Snas_3129
PFAM: inner-membrane translocator; KEGG: pna:Pnap_2604 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 0.973
Snas_3128
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bxe:Bxe_B0892 ABC sugar transporter, ATPase subunit.
  
  
 
0.901
Snas_4655
PFAM: inner-membrane translocator; KEGG: eta:ETA_00150 ribose transport permease system protein.
 
 0.801
Snas_0655
PFAM: inner-membrane translocator; KEGG: rec:RHECIAT_PC0000704 probable sugar ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.788
Snas_3700
PFAM: inner-membrane translocator; KEGG: bac:BamMC406_1213 monosaccharide-transporting ATPase; Belongs to the binding-protein-dependent transport system permease family.
 
 0.782
Snas_3701
PFAM: inner-membrane translocator; KEGG: bph:Bphy_3461 monosaccharide-transporting ATPase; Belongs to the binding-protein-dependent transport system permease family.
 
 0.776
Snas_1124
PFAM: inner-membrane translocator; KEGG: avi:Avi_7376 ABC transporter membrane spanning protein (xylose); Belongs to the binding-protein-dependent transport system permease family.
  
 0.733
Your Current Organism:
Stackebrandtia nassauensis
NCBI taxonomy Id: 446470
Other names: S. nassauensis DSM 44728, Stackebrandtia nassauensis DSM 44728, Stackebrandtia nassauensis str. DSM 44728, Stackebrandtia nassauensis strain DSM 44728
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