STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Snas_3664KEGG: pla:Plav_2389 hypothetical protein. (228 aa)    
Predicted Functional Partners:
Snas_3663
KEGG: mxa:MXAN_2431 hypothetical protein.
 
     0.639
Snas_5628
PFAM: GCN5-related N-acetyltransferase.
  
     0.619
Snas_3662
Hypothetical protein; KEGG: tau:Tola_0022 protoporphyrinogen oxidase.
       0.471
Snas_2545
KEGG: ecm:EcSMS35_4198 hypothetical protein.
  
     0.449
Snas_1302
PFAM: metallophosphoesterase; KEGG: scl:sce7712 hypothetical protein.
  
    0.426
Snas_5243
Hypothetical protein; KEGG: scl:sce4867 cellulase; Belongs to the glycosyl hydrolase 26 family.
  
     0.407
Your Current Organism:
Stackebrandtia nassauensis
NCBI taxonomy Id: 446470
Other names: S. nassauensis DSM 44728, Stackebrandtia nassauensis DSM 44728, Stackebrandtia nassauensis str. DSM 44728, Stackebrandtia nassauensis strain DSM 44728
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.