STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Snas_4062PFAM: carbonic anhydrase; KEGG: msl:Msil_2753 carbonic anhydrase. (233 aa)    
Predicted Functional Partners:
Snas_2343
PFAM: sulphate transporter; Sulfate transporter/antisigma-factor antagonist STAS; Xanthine/uracil/vitamin C permease; KEGG: dvm:DvMF_1575 sulfate transporter.
 
  
 0.925
Snas_2345
PFAM: carbonic anhydrase; KEGG: gsu:GSU1442 carbonic anhydrase family protein.
  
  
 
0.920
apt
Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.
   
    0.603
Snas_6228
PFAM: phosphoribosyltransferase; KEGG: bgl:bglu_1g31140 adenine/guanine phosphoribosyltransferase.
   
    0.603
Snas_4063
PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase; KEGG: msl:Msil_0387 monooxygenase FAD-binding.
       0.470
Snas_4370
PFAM: phosphoribosyltransferase; KEGG: mca:MCA0816 adenine phosphoribosyltransferase.
   
    0.440
Your Current Organism:
Stackebrandtia nassauensis
NCBI taxonomy Id: 446470
Other names: S. nassauensis DSM 44728, Stackebrandtia nassauensis DSM 44728, Stackebrandtia nassauensis str. DSM 44728, Stackebrandtia nassauensis strain DSM 44728
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