STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Snas_4136PFAM: Extracellular ligand-binding receptor; KEGG: rpd:RPD_4371 twin-arginine translocation pathway signal. (399 aa)    
Predicted Functional Partners:
Snas_3690
PFAM: inner-membrane translocator; KEGG: bbt:BBta_2429 putative high-affinity branched- chain amino acid transport system permease.
 
  
 0.967
Snas_5603
PFAM: Extracellular ligand-binding receptor; KEGG: mno:Mnod_0331 extracellular ligand-binding receptor.
  
  
  0.960
Snas_3774
PFAM: Extracellular ligand-binding receptor; KEGG: cvi:CV_0405 amino acid ABC transporter.
  
  
  0.930
Snas_5601
PFAM: ABC transporter related; inner-membrane translocator; SMART: AAA ATPase; KEGG: bav:BAV0485 branched-chain amino acid ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.928
Snas_3688
ABC-type branched-chain amino acid transport systems periplasmic component-like protein; KEGG: ara:Arad_12205 ABC transporter subunit.
  
  
 
0.907
Snas_2846
PFAM: Extracellular ligand-binding receptor; KEGG: rfr:Rfer_0214 extracellular ligand-binding receptor.
  
  
 
0.905
Snas_2848
PFAM: inner-membrane translocator; KEGG: mno:Mnod_1210 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.877
Snas_2847
PFAM: inner-membrane translocator; KEGG: mno:Mnod_1211 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.868
Snas_2849
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: met:M446_0760 ABC transporter related.
 
  
 0.773
Snas_2850
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: nwi:Nwi_0669 ABC-type branched-chain amino acid transport systems ATPase component.
 
  
 0.755
Your Current Organism:
Stackebrandtia nassauensis
NCBI taxonomy Id: 446470
Other names: S. nassauensis DSM 44728, Stackebrandtia nassauensis DSM 44728, Stackebrandtia nassauensis str. DSM 44728, Stackebrandtia nassauensis strain DSM 44728
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