STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Snas_4165PFAM: phosphoesterase PA-phosphatase related; SMART: phosphoesterase PA-phosphatase related; KEGG: cbs:COXBURSA331_A1415 PAP2 domain-containing protein. (307 aa)    
Predicted Functional Partners:
Snas_4168
PFAM: CDP-alcohol phosphatidyltransferase; KEGG: CG6016 gene product from transcript CG6016-RA; K00993 ethanolaminephosphotransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
 
  
 0.704
Snas_2204
KEGG: similar to Cpsf6 protein.
  
     0.676
rplF
Ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.
    
  0.657
Snas_5487
Hypothetical protein.
  
     0.656
Snas_0949
PFAM: lipopolysaccharide biosynthesis protein; KEGG: bam:Bamb_5116 exopolysaccharide transport protein family.
 
  
 0.580
Snas_3460
Hypothetical protein.
    
 
 0.571
Snas_1737
Hypothetical protein.
  
 
   0.542
Snas_0459
Hypothetical protein; KEGG: scl:sce3803 putative ATP/GTP-binding protein.
 
   0.536
Snas_4154
KEGG: geo:Geob_0350 KWG repeat protein.
  
     0.528
Snas_4133
PFAM: Acyl transferase; Beta-ketoacyl synthase; Erythronolide synthase docking; Thioesterase; phosphopantetheine-binding; KEGG: eca:ECA0603 type I polyketide synthase.
     
 0.512
Your Current Organism:
Stackebrandtia nassauensis
NCBI taxonomy Id: 446470
Other names: S. nassauensis DSM 44728, Stackebrandtia nassauensis DSM 44728, Stackebrandtia nassauensis str. DSM 44728, Stackebrandtia nassauensis strain DSM 44728
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