STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Snas_4232Hypothetical protein. (200 aa)    
Predicted Functional Partners:
Snas_0940
KEGG: dds:Ddes_1656 proton-translocating NADH- quinone oxidoreductase, chain M; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH/Ubiquinone/plastoquinone (complex I).
    
 
 0.863
Snas_1286
TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: gbm:Gbem_3914 proton-translocating NADH- quinone oxidoreductase, chain M.
    
 
 0.863
Snas_4163
Protein tyrosine/serine phosphatase; KEGG: bja:bll4165 hypothetical protein.
   
 
 0.859
Snas_4857
KEGG: mpt:Mpe_B0553 protein tyrosine/serine phosphatase.
   
 
 0.859
Snas_2343
PFAM: sulphate transporter; Sulfate transporter/antisigma-factor antagonist STAS; Xanthine/uracil/vitamin C permease; KEGG: dvm:DvMF_1575 sulfate transporter.
    
   0.841
Snas_4227
KEGG: mch:Mchl_3860 hypothetical protein.
       0.777
Snas_4231
Hypothetical protein.
       0.746
Snas_4228
Hypothetical protein.
       0.743
Snas_4229
Hypothetical protein.
       0.689
Snas_4230
Hypothetical protein.
       0.689
Your Current Organism:
Stackebrandtia nassauensis
NCBI taxonomy Id: 446470
Other names: S. nassauensis DSM 44728, Stackebrandtia nassauensis DSM 44728, Stackebrandtia nassauensis str. DSM 44728, Stackebrandtia nassauensis strain DSM 44728
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