STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Snas_4294KEGG: smd:Smed_5646 hypothetical protein. (174 aa)    
Predicted Functional Partners:
Snas_4643
TIGRFAM: trehalose-phosphatase; HAD-superfamily hydrolase, subfamily IIB; PFAM: glycoside hydrolase 15-related; trehalose- phosphatase; KEGG: bgl:bglu_1g26650 hypothetical protein.
   
    0.592
Snas_4295
PFAM: Chloramphenicol phosphotransferase family protein; KEGG: mlo:mll3789 weak similarity to chloramphenicol phosphotransferase.
       0.561
Snas_4293
PFAM: Methyltransferase type 11; UbiE/COQ5 methyltransferase; Methyltransferase type 12; KEGG: afw:Anae109_0160 methyltransferase type 11.
  
    0.547
Snas_1998
Hypothetical protein.
  
     0.522
Snas_6077
PFAM: major facilitator superfamily MFS_1; KEGG: rpc:RPC_3634 major facilitator transporter.
  
     0.519
Snas_1115
Hypothetical protein.
  
    0.514
Snas_0212
PFAM: regulatory protein ArsR; KEGG: scl:sce2340 ArsR family transcriptional regulator.
  
     0.506
Snas_1685
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: dps:DP2298 hypothetical protein.
  
     0.432
Snas_3638
PFAM: beta-lactamase domain protein; KEGG: cps:CPS_1284 metallo-beta-lactamase family protein.
  
     0.431
Snas_0211
PFAM: Activator of Hsp90 ATPase 1 family protein; KEGG: scl:sce2341 hypothetical protein.
  
     0.414
Your Current Organism:
Stackebrandtia nassauensis
NCBI taxonomy Id: 446470
Other names: S. nassauensis DSM 44728, Stackebrandtia nassauensis DSM 44728, Stackebrandtia nassauensis str. DSM 44728, Stackebrandtia nassauensis strain DSM 44728
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.