STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Snas_4368Hypothetical protein. (271 aa)    
Predicted Functional Partners:
Snas_4538
PFAM: type III restriction protein res subunit; SMART: DEAD-like helicase; KEGG: sde:Sde_1925 GGDEF family protein.
  
     0.758
Snas_6396
Hypothetical protein.
  
   
 0.670
Snas_2553
Hypothetical protein.
  
     0.651
Snas_2347
Hypothetical protein.
  
     0.626
Snas_0005
PFAM: protein of unknown function DUF721; KEGG: geo:Geob_1482 protein of unknown function DUF721.
  
     0.609
Snas_4367
Acylglycerol lipase; PFAM: alpha/beta hydrolase fold; KEGG: spe:Spro_0615 alpha/beta hydrolase fold.
       0.561
Snas_6011
Hypothetical protein.
  
     0.547
Snas_0221
Transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: rle:RL0620 hypothetical protein.
  
    0.527
Snas_3740
SMART: regulatory protein MerR; KEGG: afw:Anae109_4225 MerR family transcriptional regulator.
  
     0.496
Snas_0508
Hypothetical protein.
  
    0.484
Your Current Organism:
Stackebrandtia nassauensis
NCBI taxonomy Id: 446470
Other names: S. nassauensis DSM 44728, Stackebrandtia nassauensis DSM 44728, Stackebrandtia nassauensis str. DSM 44728, Stackebrandtia nassauensis strain DSM 44728
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.