STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Snas_4650PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mmw:Mmwyl1_4343 binding-protein-dependent transport systems inner membrane component. (314 aa)    
Predicted Functional Partners:
Snas_4648
PFAM: extracellular solute-binding protein family 1; KEGG: mmw:Mmwyl1_4345 extracellular solute-binding protein.
 
 0.993
Snas_4649
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: smd:Smed_0293 binding-protein-dependent transport systems inner membrane component.
 
  0.992
Snas_4646
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: noc:Noc_0280 ABC transporter, inner membrane subunit.
    
 
0.935
Snas_4647
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: noc:Noc_0279 ABC transporter, ATPase subunit; Belongs to the ABC transporter superfamily.
 
 0.931
Snas_0020
PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: ank:AnaeK_4268 ABC transporter-related protein; Belongs to the ABC transporter superfamily.
 
 0.909
Snas_2289
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rlt:Rleg2_5747 ABC transporter related; Belongs to the ABC transporter superfamily.
 
 0.900
Snas_1044
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: noc:Noc_0279 ABC transporter, ATPase subunit; Belongs to the ABC transporter superfamily.
 
 0.893
Snas_0170
PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: ara:Arad_9759 sugar ABC transporter.
 
 0.890
Snas_4075
PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: smd:Smed_5863 ABC transporter related; Belongs to the ABC transporter superfamily.
 
 0.886
Snas_4070
PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: rec:RHECIAT_CH0003614 sn-glycerol-3-phosphate ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.885
Your Current Organism:
Stackebrandtia nassauensis
NCBI taxonomy Id: 446470
Other names: S. nassauensis DSM 44728, Stackebrandtia nassauensis DSM 44728, Stackebrandtia nassauensis str. DSM 44728, Stackebrandtia nassauensis strain DSM 44728
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