STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Snas_4875Hypothetical protein. (638 aa)    
Predicted Functional Partners:
Snas_4874
Histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: lch:Lcho_2475 histidine kinase.
 
     0.649
Snas_0739
KEGG: hypothetical protein.
  
     0.598
Snas_4873
Two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: sml:Smlt0594 putative two-component response regulator transcriptional regulatory protein.
       0.545
Snas_3502
PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; KEGG: she:Shewmr4_1596 peptidase S8 and S53, subtilisin, kexin, sedolisin; Belongs to the peptidase S8 family.
  
     0.535
Snas_5947
Hypothetical protein; KEGG: vvu:VV2_0700 beta-lactamase class A.
  
     0.526
Snas_5490
Hypothetical protein.
  
    0.525
Snas_2359
Hypothetical protein.
  
     0.523
Snas_1599
PFAM: cell divisionFtsK/SpoIIIE; KEGG: bpt:Bpet4245 hypothetical protein.
  
   0.521
Snas_1998
Hypothetical protein.
  
     0.521
Snas_2610
PFAM: ABC-2 type transporter; KEGG: dol:Dole_0811 ABC-2 type transporter.
  
     0.515
Your Current Organism:
Stackebrandtia nassauensis
NCBI taxonomy Id: 446470
Other names: S. nassauensis DSM 44728, Stackebrandtia nassauensis DSM 44728, Stackebrandtia nassauensis str. DSM 44728, Stackebrandtia nassauensis strain DSM 44728
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.