STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Snas_5577PFAM: multicopper oxidase type 3; multicopper oxidase type 1; multicopper oxidase type 2; KEGG: lhk:LHK_00714 multicopper oxidase, type 3 precursor. (498 aa)    
Predicted Functional Partners:
hemH
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.
   
 
 0.918
Snas_4613
PFAM: Haem oxygenase-like; KEGG: hypothetical protein MGC132176.
    
 0.910
Snas_5032
Bacterioferritin; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family.
   
 
 0.910
Snas_2436
PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: bph:Bphy_7479 pyridoxal-5'-phosphate- dependent protein beta subunit.
  
  
 0.785
Snas_4715
PFAM: major facilitator superfamily MFS_1; KEGG: asa:ASA_2211 major facilitator transporter.
  
  
 0.785
Snas_4716
PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: bph:Bphy_7479 pyridoxal-5'-phosphate- dependent protein beta subunit.
  
  
 0.785
Snas_3567
KEGG: rhi:NGR_b07810 hypothetical protein.
  
 
 0.723
Snas_3903
Histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: histidine kinase A domain protein; histidine kinase HAMP region domain protein; ATP-binding region ATPase domain protein; KEGG: lch:Lcho_2475 histidine kinase.
  
 
 0.723
Snas_5524
Histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; KEGG: geo:Geob_3522 histidine kinase.
  
 
 0.723
Snas_5837
TIGRFAM: heavy metal translocating P-type ATPase; copper-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; Heavy metal transport/detoxification protein; Haloacid dehalogenase domain protein hydrolase; KEGG: ppd:Ppro_3639 heavy metal translocating P- type ATPase.
 
  
 0.577
Your Current Organism:
Stackebrandtia nassauensis
NCBI taxonomy Id: 446470
Other names: S. nassauensis DSM 44728, Stackebrandtia nassauensis DSM 44728, Stackebrandtia nassauensis str. DSM 44728, Stackebrandtia nassauensis strain DSM 44728
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