STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Snas_5682Transcriptional regulator, LuxR family; PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR; KEGG: ank:AnaeK_0902 two component transcriptional regulator, LuxR family. (341 aa)    
Predicted Functional Partners:
Snas_5683
Hypothetical protein; KEGG: Srrm2; serine/arginine repetitive matrix 2.
       0.524
Snas_5679
PFAM: ABC-2 type transporter; KEGG: ade:Adeh_2462 ABC transporter, inner membrane subunit.
       0.497
Snas_5680
PFAM: 3-dehydroquinate synthase; iron-containing alcohol dehydrogenase; KEGG: scl:sce5394 glycerol-1-phosphate dehydrogenase (NAD(P)(+)).
       0.497
Snas_5681
KEGG: ajs:Ajs_3070 nucleotidyl transferase.
       0.497
Snas_1006
KEGG: afw:Anae109_4193 hypothetical protein.
  
     0.487
Snas_6346
Transcriptional regulator, SARP family; PFAM: transcriptional activator domain; NB-ARC domain protein; transcriptional regulator domain protein; SMART: Tetratricopeptide domain protein; KEGG: bpy:Bphyt_6123 transcriptional regulator, winged helix family.
  
    0.482
Snas_3977
Transcriptional regulator, SARP family; PFAM: transcriptional activator domain; TPR repeat- containing protein; Tetratricopeptide TPR_4; NB-ARC domain protein; transcriptional regulator domain protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: scl:sce3550 hypothetical protein.
  
   0.476
Snas_2229
Hypothetical protein.
  
     0.469
Snas_6299
Hypothetical protein.
  
     0.459
Snas_3884
Transcriptional regulator, SARP family; PFAM: transcriptional activator domain; Tetratricopeptide TPR_4; TPR repeat-containing protein; NB- ARC domain protein; transcriptional regulator domain protein; SMART: Tetratricopeptide domain protein; KEGG: ade:Adeh_3289 SARP family transcriptional regulator.
  
    0.457
Your Current Organism:
Stackebrandtia nassauensis
NCBI taxonomy Id: 446470
Other names: S. nassauensis DSM 44728, Stackebrandtia nassauensis DSM 44728, Stackebrandtia nassauensis str. DSM 44728, Stackebrandtia nassauensis strain DSM 44728
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