STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Snas_5770PFAM: protein of unknown function DUF540; KEGG: apa:APP7_1355 putative sulfate transport protein CysZ. (251 aa)    
Predicted Functional Partners:
Snas_5768
Hypothetical protein.
       0.661
Snas_5769
PFAM: alpha/beta hydrolase fold; KEGG: mlo:mlr7232 hypothetical protein.
       0.568
Snas_5766
PFAM: NAD-dependent epimerase/dehydratase; KEGG: dal:Dalk_1814 NAD-dependent epimerase/dehydratase.
       0.525
Snas_5767
PFAM: phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase; KEGG: dal:Dalk_1813 phospholipid/glycerol acyltransferase.
       0.525
Snas_5765
PFAM: Protein of unknown function DUF1713; KEGG: dat:HRM2_30640 hypothetical protein.
       0.508
Snas_5771
Hypothetical protein.
       0.433
Snas_5772
Hypothetical protein.
       0.418
Snas_5773
KEGG: mucin-associated surface protein (MASP).
       0.415
Snas_5327
PFAM: Alcohol dehydrogenase zinc-binding domain protein; KEGG: cak:Caul_0428 alcohol dehydrogenase.
     
 0.400
Your Current Organism:
Stackebrandtia nassauensis
NCBI taxonomy Id: 446470
Other names: S. nassauensis DSM 44728, Stackebrandtia nassauensis DSM 44728, Stackebrandtia nassauensis str. DSM 44728, Stackebrandtia nassauensis strain DSM 44728
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