STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Snas_5845KEGG: ilo:IL1495 hypothetical protein. (215 aa)    
Predicted Functional Partners:
Snas_1052
Protein serine phosphatase with GAF(s) sensor(s); PFAM: Stage II sporulation E family protein; GAF domain protein; ATP-binding region ATPase domain protein; SMART: protein phosphatase 2C domain protein; KEGG: gbm:Gbem_2648 putative phytochrome sensor protein; SNP; SNP.
 
 
 0.985
Snas_5846
Hypothetical protein.
       0.773
Snas_0500
Hypothetical protein.
 
 
 0.716
Snas_4164
Putative PAS/PAC sensor protein; KEGG: sfu:Sfum_2453 serine phosphatase; TIGRFAM: PAS sensor protein; PFAM: Stage II sporulation E family protein; PAS fold-4 domain protein; GAF domain protein; SMART: protein phosphatase 2C domain protein; GAF domain protein.
  
 
 0.680
Snas_6367
Diguanylate cyclase/phosphodiesterase with GAF sensor; KEGG: dat:HRM2_05740 signal transduction family protein (GGDEF domain protein); TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; GGDEF domain containing protein; GAF domain protein; SMART: EAL domain protein; GGDEF domain containing protein; GAF domain protein.
  
  
 0.665
Snas_0855
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sat:SYN_00410 ABC-type transport system, ATP- binding component.
   
   0.608
Snas_5160
Hypothetical protein.
  
 
 0.594
Snas_5915
PFAM: Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: gsu:GSU2345 RsbU-related protein; SNP; SNP.
 
 
 0.552
Snas_1053
GAF sensor hybrid histidine kinase; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; GAF domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein; GAF domain protein; histidine kinase HAMP region domain protein; KEGG: scl:sce7807 hypothetical protein.
 
  
 0.550
Snas_0453
Hypothetical protein; KEGG: cco:CCC13826_1721 ABC transporter.
  
     0.539
Your Current Organism:
Stackebrandtia nassauensis
NCBI taxonomy Id: 446470
Other names: S. nassauensis DSM 44728, Stackebrandtia nassauensis DSM 44728, Stackebrandtia nassauensis str. DSM 44728, Stackebrandtia nassauensis strain DSM 44728
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.