STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Snas_5888KEGG: mlo:mlr2181 hypothetical protein. (241 aa)    
Predicted Functional Partners:
Snas_2627
KEGG: hypothetical protein.
  
     0.619
Snas_5889
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: kpe:KPK_4251 sugar ABC transporter, permease protein.
       0.586
Snas_5890
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: vpa:VPA1400 maltose transporter membrane protein.
       0.586
Snas_5891
PFAM: extracellular solute-binding protein family 1; KEGG: vha:VIBHAR_05214 maltose ABC transporter periplasmic protein.
       0.586
Snas_2241
PFAM: Endonuclease/exonuclease/phosphatase; KEGG: hypothetical protein.
  
     0.561
Snas_2016
KEGG: hypothetical protein; Belongs to the glycosyl hydrolase 18 family.
  
     0.528
Snas_1945
PFAM: Platelet-activating factor acetylhydrolase plasma/intracellular isoform II; KEGG: scl:sce0157 hypothetical protein.
  
     0.447
Snas_0256
KEGG: hypothetical protein.
  
     0.425
Snas_2859
PFAM: peptidase C45 acyl-coenzyme A:6- aminopenicillanic acid acyl-transferase; KEGG: vei:Veis_4727 peptidase C45, acyl-coenzyme A.
  
     0.423
Snas_5892
Transcriptional regulator, LacI family; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; KEGG: pzu:PHZ_c2158 transcriptional regulator, LacI family.
       0.410
Your Current Organism:
Stackebrandtia nassauensis
NCBI taxonomy Id: 446470
Other names: S. nassauensis DSM 44728, Stackebrandtia nassauensis DSM 44728, Stackebrandtia nassauensis str. DSM 44728, Stackebrandtia nassauensis strain DSM 44728
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.