STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Snas_5926PFAM: major facilitator superfamily MFS_1; KEGG: reu:Reut_B5086 major facilitator transporter. (480 aa)    
Predicted Functional Partners:
Snas_5927
PFAM: monooxygenase FAD-binding; KEGG: msl:Msil_0387 monooxygenase FAD-binding.
       0.697
Snas_5575
PFAM: major facilitator superfamily MFS_1; KEGG: oan:Oant_3227 drug resistance transporter, EmrB/QacA subfamily.
  
     0.671
Snas_5925
PFAM: regulatory protein TetR; KEGG: mlo:mlr1472 transcriptional regulator.
 
     0.645
Snas_2689
PFAM: Aspartyl/Asparaginyl beta-hydroxylase; KEGG: mno:Mnod_4878 aspartyl/asparaginyl beta- hydroxylase.
  
     0.582
Snas_1633
PFAM: major facilitator superfamily MFS_1; KEGG: sml:Smlt2678 putative transmembrane protein.
  
     0.578
Snas_2318
TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: ppg:PputGB1_3285 EmrB/QacA family drug resistance transporter.
  
     0.565
Snas_5928
Hypothetical protein.
       0.526
Snas_0015
PFAM: major facilitator superfamily MFS_1; KEGG: rme:Rmet_3984 major facilitator superfamily MFS_1.
  
     0.517
Snas_3272
TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: bte:BTH_I1424 EmrB/QacA family drug resistance transporter.
  
     0.511
Snas_2586
PFAM: major facilitator superfamily MFS_1; KEGG: bmj:BMULJ_04854 multidrug resistance protein.
  
     0.507
Your Current Organism:
Stackebrandtia nassauensis
NCBI taxonomy Id: 446470
Other names: S. nassauensis DSM 44728, Stackebrandtia nassauensis DSM 44728, Stackebrandtia nassauensis str. DSM 44728, Stackebrandtia nassauensis strain DSM 44728
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