STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Snas_6165PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase; KEGG: scl:sce7022 2,4-dichlorophenol 6- monooxygenase. (520 aa)    
Predicted Functional Partners:
Snas_6164
Transcriptional regulator, MerR family; PFAM: regulatory protein MerR; SMART: regulatory protein MerR; KEGG: bvi:Bcep1808_4693 MerR family transcriptional regulator.
 
     0.689
Snas_3295
PFAM: monooxygenase FAD-binding; KEGG: bbt:BBta_2587 putative monoxygenase.
  
     0.674
menC-2
Mandelate racemase/muconate lactonizing protein; Converts 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1- carboxylate (SHCHC) to 2-succinylbenzoate (OSB).
       0.645
Snas_3854
PFAM: monooxygenase FAD-binding; KEGG: plu:plu1743 hypothetical protein.
  
     0.572
Snas_5584
PFAM: monooxygenase FAD-binding; KEGG: plu:plu2236 hypothetical protein.
  
     0.568
Snas_3936
PFAM: monooxygenase FAD-binding; KEGG: plu:plu1743 hypothetical protein.
  
     0.547
Snas_5557
PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase; KEGG: scl:sce0981 putative oxidoreductase.
  
     0.492
Snas_4063
PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase; KEGG: msl:Msil_0387 monooxygenase FAD-binding.
  
     0.476
Snas_3006
PFAM: monooxygenase FAD-binding; KEGG: scl:sce0981 putative oxidoreductase.
  
     0.465
Snas_1719
PFAM: monooxygenase FAD-binding; KEGG: scl:sce0981 putative oxidoreductase.
  
     0.458
Your Current Organism:
Stackebrandtia nassauensis
NCBI taxonomy Id: 446470
Other names: S. nassauensis DSM 44728, Stackebrandtia nassauensis DSM 44728, Stackebrandtia nassauensis str. DSM 44728, Stackebrandtia nassauensis strain DSM 44728
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