STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Snas_6270PFAM: NUDIX hydrolase; KEGG: bra:BRADO3028 putative MutT/NUDIX family protein. (195 aa)    
Predicted Functional Partners:
Snas_6269
PFAM: DNA methylase N-4/N-6 domain protein; KEGG: pag:PLES_13311 DNA methylase N-4/N-6; Belongs to the N(4)/N(6)-methyltransferase family.
  
    0.584
Snas_6267
Hypothetical protein.
       0.581
Snas_6268
PFAM: C-5 cytosine-specific DNA methylase; KEGG: yen:YE2362 putative cytosine-specific modification methylase.
       0.581
Snas_6271
PFAM: Gp37Gp68 family protein; KEGG: bra:BRADO0295 putative phage protein GP37/Gp68.
 
     0.550
Snas_6266
KEGG: xop:PXO_05541 hypothetical protein.
  
    0.514
Snas_6265
Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily.
       0.480
Snas_6264
KEGG: oca:OCAR_5534 hypothetical protein.
       0.478
Your Current Organism:
Stackebrandtia nassauensis
NCBI taxonomy Id: 446470
Other names: S. nassauensis DSM 44728, Stackebrandtia nassauensis DSM 44728, Stackebrandtia nassauensis str. DSM 44728, Stackebrandtia nassauensis strain DSM 44728
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