STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Snas_6397Chitinase; KEGG: sml:Smlt0682 chitinase A; PFAM: glycoside hydrolase family 18; SMART: chitinase II; Belongs to the glycosyl hydrolase 18 family. (430 aa)    
Predicted Functional Partners:
Snas_4053
PFAM: glycoside hydrolase family 18; SMART: chitinase II; KEGG: hch:HCH_05453 chitinase; Belongs to the glycosyl hydrolase 18 family.
  
 0.979
Snas_4397
KEGG: cvi:CV_1440 hydrolase transmembrane protein.
 
 0.965
Snas_4408
Hypothetical protein; KEGG: cvi:CV_1440 hydrolase transmembrane protein.
  
 0.963
Snas_2708
PFAM: cellulose-binding family II; Fibronectin type III domain protein; SMART: cellulose-binding family II; Fibronectin type III domain protein; KEGG: azc:AZC_2901 type III fibronectin.
 
 
 0.952
Snas_0735
PFAM: glycoside hydrolase family 18; SMART: chitinase II; KEGG: cja:CJA_2993 endo-chitinase, putative, chi18C; Belongs to the glycosyl hydrolase 18 family.
  
 0.947
Snas_4306
Chitinase; KEGG: hch:HCH_01137 chitinase; PFAM: glycoside hydrolase family 18; chitinase domain protein; Carbohydrate-binding family V/XII; SMART: chitinase II; Carbohydrate-binding family V/XII.
 
 
0.941
Snas_4160
PFAM: glycoside hydrolase family 18; Fibronectin type III domain protein; cellulose-binding family II; SMART: chitinase II; cellulose-binding family II; Fibronectin type III domain protein; KEGG: smt:Smal_0542 glycoside hydrolase family 18.
 
 
0.924
Snas_5877
Beta-N-acetylhexosaminidase; PFAM: Glycoside hydrolase, family 20, catalytic core; KEGG: xcv:XCV3209 beta-hexosaminidase.
 
  
 0.832
Snas_0390
PFAM: Glycoside hydrolase, family 20, catalytic core; KEGG: ccs:CCNA_00456 beta-N-acetylhexosaminidase.
 
  
 0.820
Snas_1611
PFAM: chitin-binding domain 3 protein; KEGG: hypothetical protein.
   
 0.754
Your Current Organism:
Stackebrandtia nassauensis
NCBI taxonomy Id: 446470
Other names: S. nassauensis DSM 44728, Stackebrandtia nassauensis DSM 44728, Stackebrandtia nassauensis str. DSM 44728, Stackebrandtia nassauensis strain DSM 44728
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