STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xcel_0057KEGG: aeh:Mlg_2715 daunorubicin resistance ABC transporter ATPase subunit; TIGRFAM: daunorubicin resistance ABC transporter ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase. (362 aa)    
Predicted Functional Partners:
Xcel_0058
PFAM: ABC-2 type transporter; KEGG: bcr:BCAH187_A3467 ABC transporter, efflux permease protein.
     0.946
Xcel_1351
PFAM: ABC-2 type transporter; KEGG: rsq:Rsph17025_3253 ABC transporter related.
  
 0.853
Xcel_3132
PFAM: ABC-2 type transporter; KEGG: bcz:BCZK3149 ABC transporter efflux permease; daunorubicin resistance transmembrane protein.
  
 0.852
Xcel_3137
PFAM: ABC-2 type transporter; KEGG: aeh:Mlg_2716 ABC-2 type transporter.
 
    0.813
Xcel_0056
Transcriptional regulator, TetR family; PFAM: regulatory protein TetR; Tetracyclin repressor domain protein; KEGG: scl:sce6697 putative transcriptional regulator.
       0.545
Xcel_1354
PFAM: ABC-2 type transporter; KEGG: scl:sce5572 putative integral membrane transport protein.
 
  
 0.537
Xcel_0059
PFAM: amino acid permease-associated region; KEGG: pde:Pden_4334 amino acid permease-associated region.
  
   0.523
Xcel_0608
PFAM: ABC-2 type transporter; KEGG: mxa:MXAN_1598 ABC transporter, permease protein, ABC-2 family.
  
 0.519
Xcel_0418
PFAM: ABC-2 type transporter; KEGG: bcb:BCB4264_A2507 putative ABC transporter, permease protein.
  
 0.454
Xcel_0275
KEGG: scl:sce7370 hypothetical protein.
  
 
 0.446
Your Current Organism:
Xylanimonas cellulosilytica
NCBI taxonomy Id: 446471
Other names: X. cellulosilytica DSM 15894, Xylanimonas cellulosilytica DSM 15894, Xylanimonas cellulosilytica str. DSM 15894, Xylanimonas cellulosilytica strain DSM 15894
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