STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xcel_0062PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: alpha-glucosidase; K01187 alpha-glucosidase. (553 aa)    
Predicted Functional Partners:
Xcel_2419
PFAM: aminoglycoside phosphotransferase; KEGG: bpt:Bpet2370 hypothetical protein.
 
 0.992
Xcel_2418
KEGG: mxa:MXAN_3684 trehalose synthase; TIGRFAM: trehalose synthase; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain.
 
  
 
0.927
Xcel_1101
4-alpha-glucanotransferase; KEGG: rce:RC1_2119 probable maltokinase; TIGRFAM: 4-alpha-glucanotransferase; PFAM: glycoside hydrolase family 77.
  
 
 0.925
Xcel_0260
PFAM: glycoside hydrolase clan GH-D; KEGG: esa:ESA_03854 hypothetical protein.
  
 
 0.914
Xcel_2118
PFAM: glycoside hydrolase clan GH-D; KEGG: kpn:KPN_04203 putative glycoprotein.
  
 
 0.914
Xcel_2915
PFAM: glycoside hydrolase clan GH-D; KEGG: hypothetical protein.
  
 
 0.914
Xcel_0270
Fructokinase; PFAM: PfkB domain protein; KEGG: sme:SMc02164 fructokinase protein; Belongs to the carbohydrate kinase PfkB family.
   
 0.904
Xcel_2616
PFAM: glycosyltransferase 36; putative carbohydrate binding; glycosyltransferase 36 associated; KEGG: sde:Sde_1318 cellobiose phosphorylase.
   
 
 0.900
Xcel_0928
PFAM: glycoside hydrolase family 3 domain protein; KEGG: scl:sce2601 Beta-glucosidase.
   
 
 0.679
Xcel_1195
Beta-glucosidase; PFAM: glycoside hydrolase family 3 domain protein; KEGG: bha:BH1908 glucan 1,4-beta-glucosidase.
   
 
 0.679
Your Current Organism:
Xylanimonas cellulosilytica
NCBI taxonomy Id: 446471
Other names: X. cellulosilytica DSM 15894, Xylanimonas cellulosilytica DSM 15894, Xylanimonas cellulosilytica str. DSM 15894, Xylanimonas cellulosilytica strain DSM 15894
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