STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xcel_0081Dihydroxyacetone kinase, DhaK subunit; KEGG: gdi:GDI0263 putative PTS-dependent dihydroxyacetone kinase; TIGRFAM: dihydroxyacetone kinase, DhaK subunit; PFAM: Dak kinase. (331 aa)    
Predicted Functional Partners:
Xcel_0080
TIGRFAM: dihydroxyacetone kinase, L subunit; PFAM: Dak phosphatase; KEGG: bcr:BCAH187_A1134 dihydroxyacetone kinase family protein.
  
  0.999
Xcel_1155
TIGRFAM: dihydroxyacetone kinase, L subunit; PFAM: Dak phosphatase; KEGG: gdj:Gdia_2329 dihydroxyacetone kinase, L subunit.
  
  0.997
Xcel_1156
TIGRFAM: dihydroxyacetone kinase, phosphotransfer subunit; phosphocarrier, HPr family; PFAM: PTS system fructose subfamily IIA component; phosphoryl transfer system HPr; KEGG: dde:Dde_1180 phosphoenolpyruvate--protein phosphotransferase.
 
 0.996
Xcel_1154
KEGG: acr:Acry_2616 dihydroxyacetone kinase, DhaK subunit; TIGRFAM: dihydroxyacetone kinase, DhaK subunit; PFAM: Dak kinase.
  
  
 
0.905
Xcel_0391
PFAM: FAD dependent oxidoreductase; KEGG: vei:Veis_2018 FAD dependent oxidoreductase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
    
 0.826
gpsA
PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; NADP oxidoreductase coenzyme F420-dependent; Ketopantoate reductase ApbA/PanE domain protein; KEGG: glo:Glov_0029 glycerol-3-phosphate dehydrogenase (NAD(P)(+)).
   
 
 0.810
Xcel_0079
TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: CPLD2; hypothetical protein.
  
    0.774
Xcel_0078
KEGG: bha:BH3786 fructose-1,6-bisphosphate aldolase; TIGRFAM: ketose-bisphosphate aldolase; PFAM: ketose-bisphosphate aldolase class-II.
     
 0.761
Xcel_0077
GAF sensor hybrid histidine kinase; PFAM: ATP-binding region ATPase domain protein; GAF domain protein; response regulator receiver; regulatory protein LuxR; histidine kinase dimerisation and phosphoacceptor region; SMART: GAF domain protein; response regulator receiver; ATP-binding region ATPase domain protein; regulatory protein LuxR; KEGG: ade:Adeh_1998 periplasmic sensor signal transduction histidine kinase.
       0.499
Your Current Organism:
Xylanimonas cellulosilytica
NCBI taxonomy Id: 446471
Other names: X. cellulosilytica DSM 15894, Xylanimonas cellulosilytica DSM 15894, Xylanimonas cellulosilytica str. DSM 15894, Xylanimonas cellulosilytica strain DSM 15894
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