STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xcel_0093PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; KEGG: bcb:BCB4264_A1961 ABC transporter, permease/ATP-binding protein. (606 aa)    
Predicted Functional Partners:
Xcel_0931
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rec:RHECIAT_PA0000258 putative ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
 
     
0.899
Xcel_1247
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pla:Plav_2987 ABC transporter related.
 
     
0.895
metN
ABC transporter related protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.
 
     
0.889
Xcel_0101
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rle:pRL80063 putative ATP-binding component of ABC transporter.
 
     
0.885
Xcel_1616
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ppd:Ppro_3234 ABC transporter related.
 
     
0.884
Xcel_2307
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: dal:Dalk_3521 ABC transporter related.
 
   
0.884
fbpC
ABC transporter related protein; Part of the ABC transporter complex FbpABC involved in Fe(3+) ions import. Responsible for energy coupling to the transport system.
 
     
0.876
Xcel_2269
KEGG: acr:Acry_1637 ABC transporter, transmembrane region, type 1; TIGRFAM: ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase.
   
0.869
Xcel_2950
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mlo:mlr7224 sugar ABC transportor, ATP- binding protein.
 
     
0.844
Xcel_0090
PFAM: asparagine synthase; KEGG: mag:amb0105 asparagine synthase.
 
     0.808
Your Current Organism:
Xylanimonas cellulosilytica
NCBI taxonomy Id: 446471
Other names: X. cellulosilytica DSM 15894, Xylanimonas cellulosilytica DSM 15894, Xylanimonas cellulosilytica str. DSM 15894, Xylanimonas cellulosilytica strain DSM 15894
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