STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xcel_0096PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mxa:MXAN_6827 sodium ABC transporter ATP- binding protein NatA. (234 aa)    
Predicted Functional Partners:
Xcel_0098
KEGG: hypothetical protein.
 
     0.837
Xcel_0099
Hypothetical protein.
  
 
 0.794
Xcel_0097
KEGG: ret:RHE_CH02708 hypothetical protein.
       0.773
Xcel_0095
Histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; KEGG: ccs:CCNA_01207 two-component sensor histidine kinase.
  
    0.660
Xcel_2674
Hypothetical protein; KEGG: shn:Shewana3_1270 major facilitator transporter.
 
     0.592
Xcel_0101
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rle:pRL80063 putative ATP-binding component of ABC transporter.
 
    
0.534
Xcel_0105
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sit:TM1040_1274 ABC transporter related.
 
     
0.516
Xcel_0100
TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bxe:Bxe_C1161 polar amino acid ABC transporter inner membrane protein.
      0.515
Xcel_0762
Hypothetical protein; KEGG: bcj:BCAL0196 major facilitator superfamily protein.
 
   0.506
Xcel_0127
Hypothetical protein; KEGG: rsq:Rsph17025_2323 phosphate transporter.
 
   0.488
Your Current Organism:
Xylanimonas cellulosilytica
NCBI taxonomy Id: 446471
Other names: X. cellulosilytica DSM 15894, Xylanimonas cellulosilytica DSM 15894, Xylanimonas cellulosilytica str. DSM 15894, Xylanimonas cellulosilytica strain DSM 15894
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.