STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xcel_0101PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rle:pRL80063 putative ATP-binding component of ABC transporter. (262 aa)    
Predicted Functional Partners:
Xcel_0100
TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bxe:Bxe_C1161 polar amino acid ABC transporter inner membrane protein.
 0.999
Xcel_1127
TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bha:BH0171 amino acid ABC transporter (permease).
 
 0.987
Xcel_1244
TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dac:Daci_4389 polar amino acid ABC transporter, inner membrane subunit.
 
 0.960
Xcel_1245
TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bcy:Bcer98_0542 polar amino acid ABC transporter, inner membrane subunit.
 
 
 0.956
Xcel_0104
PFAM: Extracellular ligand-binding receptor; KEGG: csa:Csal_1418 extracellular ligand-binding receptor.
   
 
 0.911
Xcel_0752
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bha:BH3441 L-arabinose ABC transporter ATP- binding protein.
 
     
0.898
Xcel_0093
PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; KEGG: bcb:BCB4264_A1961 ABC transporter, permease/ATP-binding protein.
 
     
0.885
Xcel_1806
PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; KEGG: aav:Aave_3979 ABC transporter-related protein.
 
     
0.876
Xcel_0265
KEGG: oan:Oant_4612 oligopeptide/dipeptide ABC transporter, ATPase subunit; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.
 
     
0.871
Xcel_1070
PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; KEGG: scl:sce5644 carbohydrate ABC transporter.
 
     
0.865
Your Current Organism:
Xylanimonas cellulosilytica
NCBI taxonomy Id: 446471
Other names: X. cellulosilytica DSM 15894, Xylanimonas cellulosilytica DSM 15894, Xylanimonas cellulosilytica str. DSM 15894, Xylanimonas cellulosilytica strain DSM 15894
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