STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xcel_0105PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sit:TM1040_1274 ABC transporter related. (286 aa)    
Predicted Functional Partners:
Xcel_0108
PFAM: inner-membrane translocator; KEGG: inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
 0.997
Xcel_0107
PFAM: inner-membrane translocator; KEGG: rru:Rru_A3415 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
  
 0.993
Xcel_0106
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: dsh:Dshi_1981 ABC transporter related.
 
  
0.965
Xcel_0104
PFAM: Extracellular ligand-binding receptor; KEGG: csa:Csal_1418 extracellular ligand-binding receptor.
 
  
 0.923
Xcel_0761
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ccs:CCNA_03389 lantibiotic transport ATP- binding protein.
 
     
0.780
Xcel_0752
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bha:BH3441 L-arabinose ABC transporter ATP- binding protein.
     
0.777
Xcel_0750
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rle:pRL100463 putative ATP-binding component of ABC transporter.
     
0.709
Xcel_0943
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bca:BCE_2589 ATP-binding transport protein NatA.
 
     
0.673
Xcel_3131
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bcr:BCAH187_A3468 ABC transporter, ATP- binding protein.
 
     
0.631
Xcel_2711
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bsu:BSU09890 hypothetical protein.
 
     
0.620
Your Current Organism:
Xylanimonas cellulosilytica
NCBI taxonomy Id: 446471
Other names: X. cellulosilytica DSM 15894, Xylanimonas cellulosilytica DSM 15894, Xylanimonas cellulosilytica str. DSM 15894, Xylanimonas cellulosilytica strain DSM 15894
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