STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xcel_0127Hypothetical protein; KEGG: rsq:Rsph17025_2323 phosphate transporter. (258 aa)    
Predicted Functional Partners:
Xcel_0761
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ccs:CCNA_03389 lantibiotic transport ATP- binding protein.
 
   0.820
Xcel_0760
PFAM: histidine kinase dimerisation and phosphoacceptor region; ATP-binding region ATPase domain protein; KEGG: scl:sce5432 putative two-component system sensor kinase.
  
    0.647
Xcel_1906
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: smt:Smal_0255 ABC transporter related.
 
   0.526
Xcel_0096
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mxa:MXAN_6827 sodium ABC transporter ATP- binding protein NatA.
 
   0.488
Xcel_0128
Hypothetical protein.
       0.463
Xcel_1905
PFAM: ABC-2 type transporter; KEGG: bca:BCE_5484 ABC transporter, permease protein, putative.
  
     0.430
Xcel_1090
Hypothetical protein; KEGG: hha:Hhal_1736 putative ABC transporter.
  
     0.428
Your Current Organism:
Xylanimonas cellulosilytica
NCBI taxonomy Id: 446471
Other names: X. cellulosilytica DSM 15894, Xylanimonas cellulosilytica DSM 15894, Xylanimonas cellulosilytica str. DSM 15894, Xylanimonas cellulosilytica strain DSM 15894
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.