STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xcel_0140PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: swd:Swoo_1852 hypothetical protein. (244 aa)    
Predicted Functional Partners:
Xcel_0339
PFAM: protein of unknown function DUF664.
 
     0.728
Xcel_2721
KEGG: ade:Adeh_3797 hypothetical protein.
 
    0.634
Xcel_1650
PFAM: protein of unknown function DUF664.
 
     0.581
Xcel_0139
Hypothetical protein; KEGG: similar to formin, inverted.
       0.556
Xcel_0381
Hypothetical protein; KEGG: mpt:Mpe_A2047 ABC transporter, permease protein.
 
     0.550
Xcel_3296
PFAM: protein of unknown function DUF664.
 
     0.517
Xcel_2823
PFAM: protein of unknown function DUF214; KEGG: afw:Anae109_1773 hypothetical protein.
  
     0.503
Xcel_0141
PFAM: amino acid permease-associated region; Amino acid transporter transmembrane; KEGG: cbs:COXBURSA331_A0988 amino acid permease family protein.
  
    0.500
Xcel_1199
Hypothetical protein.
  
     0.484
Xcel_3191
PFAM: HNH endonuclease; SMART: HNH nuclease; KEGG: acp:A2cp1_0462 exonuclease SbcC.
  
     0.478
Your Current Organism:
Xylanimonas cellulosilytica
NCBI taxonomy Id: 446471
Other names: X. cellulosilytica DSM 15894, Xylanimonas cellulosilytica DSM 15894, Xylanimonas cellulosilytica str. DSM 15894, Xylanimonas cellulosilytica strain DSM 15894
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.