STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xcel_0157Hypothetical protein. (121 aa)    
Predicted Functional Partners:
Xcel_0158
PFAM: fatty acid desaturase; KEGG: cak:Caul_2941 fatty acid desaturase.
 
     0.628
Xcel_1687
Hypothetical protein; KEGG: LAMB1; laminin, beta 1; K05636 laminin, beta 1.
   
    0.575
Xcel_2721
KEGG: ade:Adeh_3797 hypothetical protein.
  
     0.560
Xcel_3193
KEGG: bcb:BCB4264_A4969 hypothetical protein.
  
     0.451
Xcel_1981
PFAM: RDD domain containing protein; KEGG: aav:Aave_4623 RDD domain containing protein.
  
     0.445
Xcel_3099
PFAM: protein of unknown function DUF1684; KEGG: acp:A2cp1_0109 protein of unknown function DUF1684.
  
     0.432
Xcel_1516
PFAM: NAD-dependent epimerase/dehydratase; domain of unknown function DUF1731; KEGG: dol:Dole_3066 hypothetical protein.
   
    0.426
Xcel_3226
KEGG: dac:Daci_3662 Ig family protein.
  
     0.404
Your Current Organism:
Xylanimonas cellulosilytica
NCBI taxonomy Id: 446471
Other names: X. cellulosilytica DSM 15894, Xylanimonas cellulosilytica DSM 15894, Xylanimonas cellulosilytica str. DSM 15894, Xylanimonas cellulosilytica strain DSM 15894
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.