STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xcel_0221Hypothetical protein; KEGG: afw:Anae109_0175 integral membrane protein- like protein. (430 aa)    
Predicted Functional Partners:
Xcel_0382
KEGG: hypothetical protein.
  
     0.654
Xcel_0220
PFAM: glycosyl transferase group 1; KEGG: bha:BH2688 alpha-D-mannose-alpha(1- 6)phosphatidyl myo-inositol monomannoside transferase.
       0.566
Xcel_0222
TIGRFAM: Mn2+/Fe2+ transporter, NRAMP family; PFAM: natural resistance-associated macrophage protein; KEGG: bcb:BCB4264_A1874 transport protein, NRAMP family.
       0.545
Xcel_0427
PFAM: Fibronectin type III domain protein; SMART: Fibronectin type III domain protein; KEGG: sse:Ssed_4139 putative outer membrane adhesin like proteiin.
  
     0.519
Xcel_0484
PFAM: Fibronectin type III domain protein; SMART: Fibronectin type III domain protein; KEGG: ade:Adeh_3063 VCBS.
  
     0.517
Xcel_2816
PFAM: SAF domain protein; KEGG: bpy:Bphyt_1652 Flp pilus assembly protein CpaB.
  
     0.513
Xcel_1426
Hypothetical protein.
  
     0.510
Xcel_0487
PFAM: transglutaminase domain protein; SMART: transglutaminase domain protein; KEGG: cti:RALTA_B0173 putative protease, transglutaminase motif.
  
     0.497
Xcel_0903
PFAM: Domain of unknown function DUF1918.
  
     0.487
Xcel_1806
PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; KEGG: aav:Aave_3979 ABC transporter-related protein.
  
     0.480
Your Current Organism:
Xylanimonas cellulosilytica
NCBI taxonomy Id: 446471
Other names: X. cellulosilytica DSM 15894, Xylanimonas cellulosilytica DSM 15894, Xylanimonas cellulosilytica str. DSM 15894, Xylanimonas cellulosilytica strain DSM 15894
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.