STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xcel_0231PFAM: biotin/lipoyl attachment domain-containing protein; KEGG: bpt:Bpet1203 HlyD family secretion protein. (243 aa)    
Predicted Functional Partners:
Xcel_2762
KEGG: hypothetical protein.
  
 
 0.916
Xcel_0028
PFAM: ABC transporter related; protein of unknown function DUF214; SMART: AAA ATPase; KEGG: gur:Gura_3474 ABC transporter related; Belongs to the ABC transporter superfamily. Macrolide exporter (TC 3.A.1.122) family.
  
 
 0.837
Xcel_0230
Cellulose synthase (UDP-forming); PFAM: glycosyl transferase family 2; KEGG: bph:Bphy_2377 cellulose synthase (UDP- forming).
  
  
 0.829
Xcel_0232
Endo-1,3(4)-beta-glucanase; PFAM: glycoside hydrolase family 81; KEGG: scl:sce7103 hypothetical protein.
       0.802
Xcel_2509
PFAM: protein of unknown function DUF214; KEGG: cvi:CV_4396 ABC transporter permease.
  
  
 0.681
Xcel_3156
PFAM: protein of unknown function DUF214; KEGG: gur:Gura_3474 ABC transporter related.
  
  
 0.681
Xcel_0866
PFAM: protein of unknown function DUF214; KEGG: rsp:RSP_1541 ABC transporter inner membrane protein.
  
  
 0.608
Xcel_2805
PFAM: protein of unknown function DUF214; KEGG: GK24882 gene product from transcript GK24882- RA.
  
  
 0.608
Xcel_0497
Hypothetical protein.
   
    0.535
Xcel_0498
Hypothetical protein.
   
    0.535
Your Current Organism:
Xylanimonas cellulosilytica
NCBI taxonomy Id: 446471
Other names: X. cellulosilytica DSM 15894, Xylanimonas cellulosilytica DSM 15894, Xylanimonas cellulosilytica str. DSM 15894, Xylanimonas cellulosilytica strain DSM 15894
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.