Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Xcel_0263PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: scl:sce4301 peptide ABC transporter, permease protein. (331 aa)    
Predicted Functional Partners:
Xcel_0264
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sit:TM1040_2743 binding-protein-dependent transport systems inner membrane component.
 
 0.979
Xcel_0265
KEGG: oan:Oant_4612 oligopeptide/dipeptide ABC transporter, ATPase subunit; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.
 
 
 0.973
Xcel_0266
Oligopeptide/dipeptide ABC transporter, ATPase subunit; KEGG: bbt:BBta_4864 oligopeptide ABC transporter ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.
 
 
 0.972
Xcel_0262
PFAM: extracellular solute-binding protein family 5; KEGG: scl:sce4302 ABC-type dipeptide transport system, periplasmic component.
 
 
 0.943
Xcel_0929
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sit:TM1040_2743 binding-protein-dependent transport systems inner membrane component.
 
 0.905
Xcel_0933
PFAM: extracellular solute-binding protein family 5; KEGG: scl:sce7548 ABC-type dipeptide transport system, periplasmic component.
 
 
 0.860
Xcel_3167
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMa0469 ABC transporter, permease.
 
 
 0.847
Xcel_0932
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rec:RHECIAT_PA0000259 putative ABC transporter, ATP-binding protein.
 
 
 0.843
Xcel_0268
PFAM: glycoside hydrolase family 2 TIM barrel; KEGG: similar to mannosidase, beta A, lysosomal.
 
     0.829
Xcel_0931
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rec:RHECIAT_PA0000258 putative ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
 0.816
Your Current Organism:
Xylanimonas cellulosilytica
NCBI taxonomy Id: 446471
Other names: X. cellulosilytica DSM 15894, Xylanimonas cellulosilytica DSM 15894, Xylanimonas cellulosilytica str. DSM 15894, Xylanimonas cellulosilytica strain DSM 15894
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.